# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
# $Id$

PortSystem          1.0
PortGroup           cmake 1.0

name                seqan-apps
version             1.4.1
categories          science
platforms           darwin
universal_variant   no

license             LGPL-3
maintainers         fu-berlin.de:david.weese

description         Applications distributed with the SeqAn library

long_description    SeqAn applications for the analysis of large sets of sequences, e.g. \
                    read mapping, genome comparison, local alignment, data mining.

homepage            http://www.seqan.de/projects

depends_build-append    port:boost port:coinor-liblemon

master_sites        http://packages.seqan.de/seqan-src
distfiles           seqan-src-${version}${extract.suffix}
distname            seqan-${version}
checksums           rmd160  0a9b9e8f669b719f8e72741562c9fed096320987 \
                    sha256  47c4cf698d9879000b7de514a5cb425c18c26c8b8a81e469da23b757f7680a8e

# FIXME: llvm-gcc42 is broken, https://trac.macports.org/ticket/40713
# FIXME: SeqAn 1.4.1 does not yet compile with gcc49 (will be fixed in the upcoming release 1.5)
# For OpenMP only clang really needs to be blacklisted

compiler.blacklist  *gcc-4.2 *clang* macports-gcc-4.9
compiler.fallback   macports-gcc-4.8 macports-gcc-4.7 macports-gcc-4.6 macports-gcc-4.5 macports-gcc-4.3

configure.args-append   -DSEQAN_BUILD_SYSTEM=SEQAN_RELEASE_APPS

livecheck.url       http://packages.seqan.de/
livecheck.regex     seqan-src-(\[0-9.\]+)${extract.suffix}