# $Id$

PortSystem 1.0

name                hmmer
version             3.0b2
categories          science
maintainers         mmoll openmaintainer
description         HMMER searches biological sequence databases for \
        homologous sequences.
long_description    HMMER searches biological sequence databases for \
        homologous sequences, using either single sequences or multiple \
        sequence alignments as queries. HMMER implements a technology \
        called "profile hidden Markov models" (profile HMMs). HMMER is \
        the software engine underlying many protein family domain \
        databases and large-scale annotation pipelines, including the \
        Pfam and SMART databases.
homepage            http://hmmer.janelia.org/
platforms           darwin
master_sites        ftp://selab.janelia.org/pub/software/hmmer3/
checksums           md5     b8f5f2baa9e56ed029fea9e6939f8d36 \
                    sha1    8466c180a9678c5ead58cf66d8d52879218e77ef \
                    rmd160  693705a0f2ffb507c037a23a44cfa7c95289978c
patchfiles          patch-Makefile.in.diff
use_parallel_build  no
livecheck.check     regex
livecheck.url       ${homepage}
livecheck.regex     The current version is HMMER (\[0-9.b\]+)