# -*- coding: utf-8; mode: tcl; tab-width: 4; indent-tabs-mode: nil; c-basic-offset: 4 -*- vim:fenc=utf-8:ft=tcl:et:sw=4:ts=4:sts=4
# $Id$

PortSystem          1.0
PortGroup           perl5 1.0

perl5.branches      5.24
perl5.setup         eval 2.2.8
revision            3
# see RPM/eval.spec for licensing
license             GPL
categories          perl biology
maintainers         cse.wustl.edu:rpz
description         Perl module for parameter estimation with hidden Markov models.
long_description    iPE is parameter estimation software for generalized hidden Markov models. \
                    For information and documentation, see http://genes.cse.wustl.edu.

homepage            http://mblab.wustl.edu
master_sites        http://mblab.wustl.edu/software/download/

checksums           rmd160  2f1572e4d9996760b48284fc5f2a589c56008a5d \
                    sha256  5cce1df4a08ab5fa5d81e572c876ed2bd02041f5ac3cea73d3f7eee87c7c1d9c

platforms           darwin

if {${perl5.major} != ""} {
    use_configure   no

    build {}
    test {}

    destroot.cmd {}
    destroot {
        set installvendorlib [perl5.extract_config installvendorlib]
        file mkdir ${destroot}${installvendorlib}
        xinstall -m 0644 -W ${worksrcpath} Eval.pm GTF.pm ${destroot}${installvendorlib}
        xinstall -m 0755 -W ${worksrcpath} combine_eval_reports.pl eval.pl evaluate_gtf.pl filter_badlist.pl filter_gtfs.pl get_distribution.pl get_general_stats.pl get_overlap_stats.pl gff3_to_gtf.pl graph_gtfs.pl make_intron_lenght_vs_performance_graph.pl validate_gtf.pl validate_splice_sites.pl ${destroot}${prefix}/bin
    }
}

livecheck.type      regex
livecheck.url       ${master_sites}
livecheck.regex     "eval-(\\d+(?:\\.\\d+)*)${extract.suffix}"